Class NexusImporter

java.lang.Object
jebl.evolution.io.NexusImporter
All Implemented Interfaces:
Iterable<Tree>, AlignmentImporter, DistanceMatrixImporter, SequenceImporter, TreeImporter

public class NexusImporter extends Object implements AlignmentImporter, SequenceImporter, TreeImporter, DistanceMatrixImporter
Class for importing NEXUS file format. This is a good starting point for documentation about the nexus file format: https://www.nescent.org/wg_phyloinformatics/NEXUS_Specification For a quick check if something is probably valid or not, consider this attempt at a nexus grammar (the above page says "Don't treat this as gospel, its just an attempt to get the syntax rules"): http://www.cs.nmsu.edu/~epontell/nexus/nexus_grammar
Version:
$Id: NexusImporter.java 1052 2010-05-10 00:45:35Z richardmoir $
Author:
Andrew Rambaut, Alexei Drummond