Uses of Class
jebl.evolution.align.ProfileCharacter
Packages that use ProfileCharacter
Package
Description
Provides classes and interfaces for pairwise alignment of two sequences.
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Uses of ProfileCharacter in jebl.evolution.align
Methods in jebl.evolution.align that return ProfileCharacterModifier and TypeMethodDescriptionstatic ProfileCharacter
ProfileCharacter.getImmutableProfileCharacter
(char character) An immutable ProfileCharacter that uses less memory than a mutable profile character.Methods in jebl.evolution.align with parameters of type ProfileCharacterModifier and TypeMethodDescriptionvoid
ProfileCharacter.addProfileCharacter
(ProfileCharacter character) void
ProfileCharacter.removeProfileCharacter
(ProfileCharacter character) static float
ProfileCharacter.score
(ProfileCharacter character1, ProfileCharacter character2, Scores scores) static float
ProfileCharacter.scoreSelf
(ProfileCharacter character, Scores scores)